Hi Diane,
So sorry for the delayed response. I reviewed your model, and it appears that under most categories, LPG vehicles have a lower fuel economy compared to CNG and Gasoline vehicles, so it requires more energy to cover the same distance. This may be the reason why the LPG scenario appears to have higher CO2 levels than the other scenarios.
I would also check that you are using the same fuel characteristics in your calculations as the ones that are currently being used in LEAP. To review this, go into General --> Fuels. These are default values, so feel free to edit based on the fuel characteristics in the region you are studying.
Hope this helps,
Emily